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@Lotfollahi-lab

Lotfollahi-lab

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  1. nichecompass nichecompass Public

    End-to-end analysis of spatial multi-omics data

    Python 105 16

  2. mintflow mintflow Public

    Generation of disentangled microenvironment-induced and intrinsic gene expression vectors from spatial transcriptomics data

    Python 26 4

  3. CellDISECT CellDISECT Public

    Fairness in single-cell data

    Python 18 3

  4. Perturbgen Perturbgen Public

    Shell 15 3

  5. nichecompass-reproducibility nichecompass-reproducibility Public

    Reproducible analyses for the NicheCompass manuscript

    Jupyter Notebook 13 2

  6. SP-FM SP-FM Public

    MixFlow: Mixture-Conditioned Flow Matching for Out-of-Distribution Generalization

    Python 9 2

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