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Add soft x-ray tomography#759

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stephen-riggs wants to merge 12 commits intomainfrom
sxt-context
Open

Add soft x-ray tomography#759
stephen-riggs wants to merge 12 commits intomainfrom
sxt-context

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@stephen-riggs stephen-riggs commented Mar 12, 2026

Adds a context file for SXT data collection, triggered if txrm or xrm files are seen. This will register data collection groups, data collections, processing jobs and autoprocprograms for txrm files.

When a txrm file is seen the metadata is read from the header and processing is launched with a newly defined recipe "sxt-tomo-align"

Requires a new experiment type in ispyb to be made

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codecov bot commented Mar 13, 2026

Codecov Report

❌ Patch coverage is 76.15894% with 36 lines in your changes missing coverage. Please review.
✅ Project coverage is 48.10%. Comparing base (bdcb6d6) to head (7147b6b).
⚠️ Report is 2 commits behind head on main.

Additional details and impacted files
@@            Coverage Diff             @@
##             main     #759      +/-   ##
==========================================
+ Coverage   47.95%   48.10%   +0.14%     
==========================================
  Files          91       93       +2     
  Lines        9973    10254     +281     
  Branches     1290     1335      +45     
==========================================
+ Hits         4783     4933     +150     
- Misses       4967     5082     +115     
- Partials      223      239      +16     
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@stephen-riggs stephen-riggs marked this pull request as ready for review March 13, 2026 15:59
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